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• Repository
  • O2C
    • CircadianOscillationModel
    • CircadianChaosModel
    • UniformTimeCourseSimulation
    • OscillationTask
    • ChaosTask
    • TimeDG
    • timmRNAChaosDG
    • timmRNAOscillationDG
    • PERtimOscillationDG
    • PERtimChaosDG
    • timmRNAOscillationAndChaosOutput
    • timmRNAOscillationLimitCycleOutput
    • timmRNAChaosLimitCycleOutput
    • PERtimOscillationAndChaosOutput
    • OscillationTimeDG
    • ChaosTimeDG
  • Vleaf cell division models
    • Single cell simulation
    • Vleaf Framework
    • Growth sans division model
    • Divide over principal axis model
    • Divide over explicit axis model
    • Divide over arbitrary axis model
    • Run growth sans division
    • Run divide over principal axis
    • Run divide over explicit axis
    • Run divide over arbitrary axis
    • Output growth sans division
    • Output divide over principal axis
    • Output divide over explicit axis
    • Output divide over arbitrary axis
    • Generate growth sans division animation
    • Generate division over principal axis animation
    • Generate division over explicit axis animation
    • Generate division over arbitrary axis animation
  • Vleaf empty model plugin
    • Vleaf Framework
    • Single cell simulation
    • Run empty model with single cell leaf
    • Generate movie from screenshots
    • First model output
    • Empty model
  • Vleaf polar auxin transport models
    • Vleaf Framework
    • Auxin upstream pumping model
    • PIN1 recycling model
    • Auxin upstream pumping simulation
    • PIN1 recycling simulation
    • Run PIN1 recycling
    • Run Auxin upstream pumping
    • Generate auxin upstream pumping animation
    • Generate PIN1 recycling animation
    • Output PIN1 recycling
    • Output auxin upstream pumping
  • Vleaf reaction-diffusion models
    • Reaction-diffusion dependent coloring model
    • Diffusion in a growing domain model
    • Growth-patterning feedback model
    • Vleaf Framework
    • Reaction-diffusion dependent coloring simulation
    • Diffusion in a growing domain simulation
    • Growth-patterning feedback simulation
    • Run reaction-diffusion dependent coloring
    • Run diffusion in a growing domain
    • Run growth-patterning feedback
    • Generate reaction-diffusion dependent coloring animation
    • Generate diffusion in a growing domain animation
    • Generate growth-patterning feedback animation
    • Output reaction-diffusion dependent coloring
    • Output diffusion in a growing domain
    • Output growth-patterning feedback
    • Generate Ficks laws of diffusion animation
    • Fick's laws of diffusion simulation
    • Output Fick's laws of diffusion
    • Fick's laws of diffusion model
    • Run Fick's laws of diffusion